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FASTA format  

2011-05-10 17:01:15|  分类: Doc |  标签: |举报 |字号 订阅

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A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. The description line is distinguished from the sequence data by a greater-than (">") symbol in the first column. The word following the ">" symbol is the identifier (unique required) of the sequence, and the rest of the line is the description (both are optional). There should be no space between the ">" and the first letter of the identifier. It is recommended that all lines of text be shorter than 80 characters. The sequence ends if another line starting with a ">" appears; this indicates the start of another sequence. 

A simple example of four sequence in FASTA format (Note that the bold part should be unique):

>Primer1 The first primer
CTGTTTAAGACTCACCCTGAGAC
>Primer2 The second primer
GGTGCAACCATGCTTCTTCA
>Primer3 The third primer
CTGCCGAGATCCAGCCTCTA
>Primer4 The fourth primer
GCATCTGCTCCAAAGTCCCC
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